Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 AC132008.2-207ENST00000454517 770 ntBASIC19.92■□□□□ 0.78
HERC6Q8IVU3 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 AC096582.2-201ENST00000510860 516 ntBASIC19.92■□□□□ 0.78
HERC6Q8IVU3 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 PIN1-206ENST00000587625 878 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
HERC6Q8IVU3 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 TREX1-205ENST00000625293 1783 ntBASIC19.91■□□□□ 0.78
HERC6Q8IVU3 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
HERC6Q8IVU3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 ZNF259P1-201ENST00000407656 1365 ntBASIC19.9■□□□□ 0.78
HERC6Q8IVU3 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC19.9■□□□□ 0.78
HERC6Q8IVU3 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
HERC6Q8IVU3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms