Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.75■□□□□ 0.27
CROCCP3Q8IVE0 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 AC092850.2-201ENST00000623821 2697 ntBASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 YBX1P1-201ENST00000445822 960 ntBASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 TERF1P5-201ENST00000477545 1207 ntBASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CROCCP3Q8IVE0 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 PTGDR2-201ENST00000332539 2895 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.73■□□□□ 0.27
CROCCP3Q8IVE0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 PRKCSH-205ENST00000587327 2189 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 KRT18P68-201ENST00000392293 1000 ntBASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 KRT19P1-201ENST00000405746 1186 ntBASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 FEM1AP3-201ENST00000403722 1741 ntBASIC16.72■□□□□ 0.27
CROCCP3Q8IVE0 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms