Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
RNF135Q8IUD6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 POLD2P1-201ENST00000511220 997 ntBASIC19.51■□□□□ 0.71
RNF135Q8IUD6 MOK-208ENST00000519058 917 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.51■□□□□ 0.71
RNF135Q8IUD6 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 GPAT2P1-201ENST00000444924 1672 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 AC036111.1-201ENST00000533973 1582 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 HMGN1P19-201ENST00000436976 333 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 AC090616.6-201ENST00000582640 721 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 LINC02084-201ENST00000606069 1096 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 ABBA01031661.1-201ENST00000634362 1253 ntBASIC19.5■□□□□ 0.71
RNF135Q8IUD6 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.5■□□□□ 0.71
RNF135Q8IUD6 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 RNF165-205ENST00000588679 2904 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AC233702.3-201ENST00000578656 1387 ntBASIC19.49■□□□□ 0.71
RNF135Q8IUD6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
RNF135Q8IUD6 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms