Protein–RNA interactions for Protein: Q8HWS3

RFX6, DNA-binding protein RFX6, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX6Q8HWS3 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RFX6Q8HWS3 AC034236.2-201ENST00000606662 1610 ntBASIC19.22■□□□□ 0.67
RFX6Q8HWS3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 AL390955.1-201ENST00000428694 934 ntBASIC19.21■□□□□ 0.67
RFX6Q8HWS3 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RFX6Q8HWS3 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 AC036111.1-201ENST00000533973 1582 ntBASIC19.2■□□□□ 0.66
RFX6Q8HWS3 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RFX6Q8HWS3 AC135776.1-201ENST00000319817 2481 ntBASIC19.19■□□□□ 0.66
RFX6Q8HWS3 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 AP000593.1-201ENST00000393668 712 ntBASIC19.19■□□□□ 0.66
RFX6Q8HWS3 MIR1238-201ENST00000408483 83 ntBASIC19.19■□□□□ 0.66
RFX6Q8HWS3 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RFX6Q8HWS3 NOC2LP1-202ENST00000452600 2235 ntBASIC19.19■□□□□ 0.66
RFX6Q8HWS3 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 AP003041.3-201ENST00000527151 707 ntBASIC19.18■□□□□ 0.66
RFX6Q8HWS3 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RFX6Q8HWS3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms