Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 NAPSB-206ENST00000562112 1266 ntBASIC16.28■□□□□ 0.2
RTTNQ86VV8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 AL353719.1-201ENST00000566847 864 ntBASIC16.28■□□□□ 0.2
RTTNQ86VV8 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 FAM87A-204ENST00000613235 858 ntBASIC16.28■□□□□ 0.2
RTTNQ86VV8 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
RTTNQ86VV8 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16.28■□□□□ 0.2
RTTNQ86VV8 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 LINC01238-205ENST00000567549 1107 ntBASIC16.27■□□□□ 0.2
RTTNQ86VV8 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 AC092338.2-201ENST00000568827 1415 ntBASIC16.27■□□□□ 0.2
RTTNQ86VV8 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.27■□□□□ 0.2
RTTNQ86VV8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RTTNQ86VV8 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 BX664615.1-201ENST00000443558 458 ntBASIC16.27■□□□□ 0.19
RTTNQ86VV8 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.19
RTTNQ86VV8 AC106820.2-201ENST00000563775 3264 ntBASIC16.27■□□□□ 0.19
RTTNQ86VV8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
RTTNQ86VV8 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RTTNQ86VV8 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 LIN28AP1-201ENST00000429574 405 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 AP003041.3-201ENST00000527151 707 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 KRT8P32-201ENST00000512863 1461 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RTTNQ86VV8 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 TSPY14P-201ENST00000303979 915 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.26■□□□□ 0.19
RTTNQ86VV8 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.26■□□□□ 0.19
RTTNQ86VV8 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms