Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
USP45Q70EL2 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 ARMC10P1-201ENST00000313754 855 ntBASIC18.47■□□□□ 0.55
USP45Q70EL2 PVRIG2P-201ENST00000435460 978 ntBASIC18.47■□□□□ 0.55
USP45Q70EL2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.47■□□□□ 0.55
USP45Q70EL2 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
USP45Q70EL2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
USP45Q70EL2 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.47■□□□□ 0.55
USP45Q70EL2 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC18.46■□□□□ 0.55
USP45Q70EL2 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.46■□□□□ 0.55
USP45Q70EL2 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.46■□□□□ 0.55
USP45Q70EL2 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
USP45Q70EL2 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.46■□□□□ 0.55
USP45Q70EL2 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.46■□□□□ 0.55
USP45Q70EL2 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
USP45Q70EL2 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC18.46■□□□□ 0.55
USP45Q70EL2 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
USP45Q70EL2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 AC004408.2-201ENST00000623613 2777 ntBASIC18.46■□□□□ 0.55
USP45Q70EL2 AC126763.1-201ENST00000552015 2118 ntBASIC18.46■□□□□ 0.55
USP45Q70EL2 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
USP45Q70EL2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.46■□□□□ 0.54
USP45Q70EL2 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.45■□□□□ 0.54
USP45Q70EL2 HBZP1-201ENST00000354915 429 ntBASIC18.45■□□□□ 0.54
USP45Q70EL2 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.45■□□□□ 0.54
USP45Q70EL2 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.45■□□□□ 0.54
USP45Q70EL2 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.45■□□□□ 0.54
USP45Q70EL2 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.45■□□□□ 0.54
USP45Q70EL2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.45■□□□□ 0.54
USP45Q70EL2 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.45■□□□□ 0.54
USP45Q70EL2 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
USP45Q70EL2 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
USP45Q70EL2 AL391807.1-203ENST00000604392 2365 ntBASIC18.45■□□□□ 0.54
USP45Q70EL2 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.45■□□□□ 0.54
USP45Q70EL2 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.44■□□□□ 0.54
USP45Q70EL2 AL138781.2-201ENST00000617896 1843 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
USP45Q70EL2 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.44■□□□□ 0.54
USP45Q70EL2 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.44■□□□□ 0.54
USP45Q70EL2 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.44■□□□□ 0.54
USP45Q70EL2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.44■□□□□ 0.54
USP45Q70EL2 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
USP45Q70EL2 AL031133.1-201ENST00000406807 723 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 AC092597.1-201ENST00000487352 616 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.44■□□□□ 0.54
USP45Q70EL2 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.44■□□□□ 0.54
USP45Q70EL2 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.44■□□□□ 0.54
USP45Q70EL2 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.44■□□□□ 0.54
USP45Q70EL2 ZNF444P1-201ENST00000559497 298 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 HYMAI.1-201ENST00000620949 238 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 AC079602.3-201ENST00000623931 403 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.44■□□□□ 0.54
USP45Q70EL2 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
USP45Q70EL2 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.44■□□□□ 0.54
USP45Q70EL2 WIZP1-201ENST00000531444 2299 ntBASIC18.44■□□□□ 0.54
USP45Q70EL2 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
USP45Q70EL2 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.44■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 40.8 ms