Protein–RNA interactions for Protein: Q6ZMN8

CCNI2, Cyclin-I2, humanhuman

Predicted RBP Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNI2Q6ZMN8 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 AC106820.2-201ENST00000563775 3264 ntBASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 AL499627.1-201ENST00000569373 2188 ntBASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCNI2Q6ZMN8 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 AL645608.8-201ENST00000606034 2086 ntBASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.55■□□□□ 0.72
CCNI2Q6ZMN8 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 AC012317.2-201ENST00000623305 2251 ntBASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 AF186192.3-201ENST00000583427 947 ntBASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCNI2Q6ZMN8 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 AC138028.4-201ENST00000564984 1845 ntBASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.53■□□□□ 0.72
CCNI2Q6ZMN8 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNI2Q6ZMN8 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
CCNI2Q6ZMN8 AC093677.2-201ENST00000600169 1863 ntBASIC19.52■□□□□ 0.72
CCNI2Q6ZMN8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
CCNI2Q6ZMN8 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC19.52■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms