Protein–RNA interactions for Protein: Q6PJG9

LRFN4, Leucine-rich repeat and fibronectin type-III domain-containing protein 4, humanhuman

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4Q6PJG9 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.63■□□□□ 0.25
LRFN4Q6PJG9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.63■□□□□ 0.25
LRFN4Q6PJG9 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
LRFN4Q6PJG9 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.63■□□□□ 0.25
LRFN4Q6PJG9 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN4Q6PJG9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
LRFN4Q6PJG9 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 MTMR9LP-203ENST00000426597 1545 ntBASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 ANO7L1-203ENST00000602586 1720 ntBASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.62■□□□□ 0.25
LRFN4Q6PJG9 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 RCC2P3-201ENST00000418112 1537 ntBASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 MIR1238-201ENST00000408483 83 ntBASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
LRFN4Q6PJG9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 AC012313.1-201ENST00000593393 3059 ntBASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 AL023803.3-201ENST00000615559 522 ntBASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
LRFN4Q6PJG9 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.59■□□□□ 0.25
LRFN4Q6PJG9 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms