Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
NIPAL3Q6P499 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 AC008764.6-201ENST00000595909 2069 ntBASIC16.81■□□□□ 0.28
NIPAL3Q6P499 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 FITM1-202ENST00000559294 800 ntBASIC16.81■□□□□ 0.28
NIPAL3Q6P499 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
NIPAL3Q6P499 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
NIPAL3Q6P499 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 MYC-208ENST00000641036 567 ntBASIC16.79■□□□□ 0.28
NIPAL3Q6P499 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC16.79■□□□□ 0.28
NIPAL3Q6P499 KRT8P32-201ENST00000512863 1461 ntBASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms