Protein–RNA interactions for Protein: Q56A73

SPIN4, Spindlin-4, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN4Q56A73 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SPIN4Q56A73 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.63■□□□□ 0.41
SPIN4Q56A73 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 GMCL1P1-201ENST00000463439 1581 ntBASIC17.62■□□□□ 0.41
SPIN4Q56A73 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 KRT18P23-201ENST00000435622 1283 ntBASIC17.62■□□□□ 0.41
SPIN4Q56A73 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AL355075.4-201ENST00000554988 638 ntBASIC17.62■□□□□ 0.41
SPIN4Q56A73 CR769767.2-201ENST00000622735 460 ntBASIC17.62■□□□□ 0.41
SPIN4Q56A73 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AC010653.2-201ENST00000623505 997 ntBASIC17.62■□□□□ 0.41
SPIN4Q56A73 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC17.62■□□□□ 0.41
SPIN4Q56A73 AL163051.1-201ENST00000569214 1512 ntBASIC17.62■□□□□ 0.41
SPIN4Q56A73 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
SPIN4Q56A73 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 ESPNP-201ENST00000270691 2015 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 TSPY14P-201ENST00000303979 915 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 MIR149-201ENST00000384879 89 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 AC007663.1-201ENST00000438948 1240 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 AC009065.1-201ENST00000564055 1225 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 MIR4497-201ENST00000583208 89 ntBASIC17.61■□□□□ 0.41
SPIN4Q56A73 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
SPIN4Q56A73 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
SPIN4Q56A73 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.6■□□□□ 0.41
SPIN4Q56A73 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 AC009102.3-201ENST00000623118 1491 ntBASIC17.6■□□□□ 0.41
SPIN4Q56A73 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
SPIN4Q56A73 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.6■□□□□ 0.41
SPIN4Q56A73 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms