Protein–RNA interactions for Protein: Q2M3G4

SHROOM1, Protein Shroom1, humanhuman

Predicted RBP Predictions only

Length 852 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1Q2M3G4 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.49■■□□□ 1.03
SHROOM1Q2M3G4 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHROOM1Q2M3G4 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SHROOM1Q2M3G4 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC21.49■■□□□ 1.03
SHROOM1Q2M3G4 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
SHROOM1Q2M3G4 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
SHROOM1Q2M3G4 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 MIR149-201ENST00000384879 89 ntBASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 TSPY12P-201ENST00000421279 868 ntBASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 AL160237.2-201ENST00000556165 472 ntBASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SHROOM1Q2M3G4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 AP000593.1-201ENST00000393668 712 ntBASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 LSM5-204ENST00000409909 740 ntTSL 2 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 ABR-217ENST00000572441 563 ntTSL 4 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 BNIP3P18-201ENST00000593976 575 ntBASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SHROOM1Q2M3G4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 AC009102.3-201ENST00000623118 1491 ntBASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 MYLKP1-201ENST00000509077 1580 ntBASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 AF238378.1-201ENST00000526806 358 ntBASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 TP73-AS1-207ENST00000624167 988 ntBASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SHROOM1Q2M3G4 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SHROOM1Q2M3G4 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.03
SHROOM1Q2M3G4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SHROOM1Q2M3G4 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC21.45■■□□□ 1.03
SHROOM1Q2M3G4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 COBL-210ENST00000632460 1941 ntTSL 5 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 LINC01126-201ENST00000623515 1646 ntBASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.45■■□□□ 1.02
SHROOM1Q2M3G4 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms