Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH1Q08174 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
PCDH1Q08174 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
PCDH1Q08174 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
PCDH1Q08174 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH1Q08174 KRT18P23-201ENST00000435622 1283 ntBASIC17.79■□□□□ 0.44
PCDH1Q08174 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH1Q08174 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.79■□□□□ 0.44
PCDH1Q08174 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
PCDH1Q08174 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.79■□□□□ 0.44
PCDH1Q08174 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 SDHAP2-201ENST00000455183 2001 ntBASIC17.79■□□□□ 0.44
PCDH1Q08174 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
PCDH1Q08174 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH1Q08174 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 HMGA1P5-201ENST00000412453 271 ntBASIC17.78■□□□□ 0.44
PCDH1Q08174 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC17.78■□□□□ 0.44
PCDH1Q08174 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 NEK4P2-201ENST00000580004 1012 ntBASIC17.78■□□□□ 0.44
PCDH1Q08174 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 AC112497.1-201ENST00000624824 639 ntBASIC17.78■□□□□ 0.44
PCDH1Q08174 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH1Q08174 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.78■□□□□ 0.44
PCDH1Q08174 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
PCDH1Q08174 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
PCDH1Q08174 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH1Q08174 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH1Q08174 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC17.77■□□□□ 0.44
PCDH1Q08174 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
PCDH1Q08174 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
PCDH1Q08174 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
PCDH1Q08174 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDH1Q08174 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.77■□□□□ 0.44
PCDH1Q08174 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.77■□□□□ 0.44
PCDH1Q08174 AC009065.1-201ENST00000564055 1225 ntBASIC17.77■□□□□ 0.44
PCDH1Q08174 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
PCDH1Q08174 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.77■□□□□ 0.44
PCDH1Q08174 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
PCDH1Q08174 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
PCDH1Q08174 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.77■□□□□ 0.44
PCDH1Q08174 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH1Q08174 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.77■□□□□ 0.43
PCDH1Q08174 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
PCDH1Q08174 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.76■□□□□ 0.43
PCDH1Q08174 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 AC009102.3-201ENST00000623118 1491 ntBASIC17.76■□□□□ 0.43
PCDH1Q08174 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
PCDH1Q08174 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
PCDH1Q08174 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms