Protein–RNA interactions for Protein: P98155

VLDLR, Very low-density lipoprotein receptor, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLRP98155 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
VLDLRP98155 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
VLDLRP98155 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC17.26■□□□□ 0.35
VLDLRP98155 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.25■□□□□ 0.35
VLDLRP98155 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
VLDLRP98155 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 PEX7-202ENST00000367756 680 ntTSL 3 BASIC17.25■□□□□ 0.35
VLDLRP98155 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
VLDLRP98155 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.25■□□□□ 0.35
VLDLRP98155 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 PRSS44-201ENST00000515154 1146 ntBASIC17.25■□□□□ 0.35
VLDLRP98155 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.25■□□□□ 0.35
VLDLRP98155 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.25■□□□□ 0.35
VLDLRP98155 MTDHP1-201ENST00000605323 784 ntBASIC17.25■□□□□ 0.35
VLDLRP98155 AL359736.2-201ENST00000621992 437 ntBASIC17.25■□□□□ 0.35
VLDLRP98155 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.25■□□□□ 0.35
VLDLRP98155 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
VLDLRP98155 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 MIR718-201ENST00000390190 70 ntBASIC17.24■□□□□ 0.35
VLDLRP98155 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.24■□□□□ 0.35
VLDLRP98155 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC17.24■□□□□ 0.35
VLDLRP98155 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VLDLRP98155 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC17.24■□□□□ 0.35
VLDLRP98155 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.24■□□□□ 0.35
VLDLRP98155 AC139713.2-201ENST00000641328 2723 ntBASIC17.24■□□□□ 0.35
VLDLRP98155 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.24■□□□□ 0.35
VLDLRP98155 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
VLDLRP98155 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.23■□□□□ 0.35
VLDLRP98155 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.23■□□□□ 0.35
VLDLRP98155 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VLDLRP98155 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.23■□□□□ 0.35
VLDLRP98155 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.23■□□□□ 0.35
VLDLRP98155 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.23■□□□□ 0.35
VLDLRP98155 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VLDLRP98155 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC17.23■□□□□ 0.35
VLDLRP98155 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
VLDLRP98155 SLC25A6P5-201ENST00000435663 894 ntBASIC17.23■□□□□ 0.35
VLDLRP98155 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.23■□□□□ 0.35
VLDLRP98155 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC17.23■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms