Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.3■□□□□ 0.36
RPS3AP61247 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 PCDHA12-202ENST00000613593 2588 ntBASIC17.3■□□□□ 0.36
RPS3AP61247 MMP23A-201ENST00000234610 1017 ntBASIC17.3■□□□□ 0.36
RPS3AP61247 AC011506.1-201ENST00000474329 610 ntBASIC17.3■□□□□ 0.36
RPS3AP61247 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.3■□□□□ 0.36
RPS3AP61247 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS3AP61247 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS3AP61247 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.3■□□□□ 0.36
RPS3AP61247 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS3AP61247 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS3AP61247 AC130371.2-201ENST00000619443 611 ntBASIC17.3■□□□□ 0.36
RPS3AP61247 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.3■□□□□ 0.36
RPS3AP61247 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS3AP61247 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
RPS3AP61247 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 ZNF815P-204ENST00000434898 1737 ntBASIC17.3■□□□□ 0.36
RPS3AP61247 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
RPS3AP61247 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.3■□□□□ 0.36
RPS3AP61247 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
RPS3AP61247 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
RPS3AP61247 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.29■□□□□ 0.36
RPS3AP61247 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 Z98044.1-201ENST00000632503 1764 ntBASIC17.29■□□□□ 0.36
RPS3AP61247 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.29■□□□□ 0.36
RPS3AP61247 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.29■□□□□ 0.36
RPS3AP61247 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
RPS3AP61247 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS3AP61247 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS3AP61247 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 SIRPAP1-201ENST00000448467 1770 ntBASIC17.28■□□□□ 0.36
RPS3AP61247 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS3AP61247 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS3AP61247 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
RPS3AP61247 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 MIR1238-201ENST00000408483 83 ntBASIC17.28■□□□□ 0.36
RPS3AP61247 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.28■□□□□ 0.36
RPS3AP61247 Z85996.1-201ENST00000494644 937 ntBASIC17.28■□□□□ 0.36
RPS3AP61247 AC097488.1-201ENST00000507834 756 ntBASIC17.28■□□□□ 0.36
RPS3AP61247 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 ARL16-209ENST00000573715 763 ntTSL 3 BASIC17.28■□□□□ 0.36
RPS3AP61247 ARL16-211ENST00000576135 694 ntTSL 3 BASIC17.28■□□□□ 0.36
RPS3AP61247 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.28■□□□□ 0.36
RPS3AP61247 AP000525.1-201ENST00000608286 694 ntBASIC17.28■□□□□ 0.36
RPS3AP61247 AP000692.2-201ENST00000608391 879 ntBASIC17.28■□□□□ 0.36
RPS3AP61247 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.28■□□□□ 0.36
RPS3AP61247 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
RPS3AP61247 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms