Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUBP1P53384 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
NUBP1P53384 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.33■□□□□ 0.53
NUBP1P53384 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
NUBP1P53384 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
NUBP1P53384 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC18.33■□□□□ 0.53
NUBP1P53384 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.33■□□□□ 0.53
NUBP1P53384 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 METTL26-205ENST00000397666 726 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.33■□□□□ 0.52
NUBP1P53384 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC18.33■□□□□ 0.52
NUBP1P53384 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.33■□□□□ 0.52
NUBP1P53384 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.33■□□□□ 0.52
NUBP1P53384 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC18.33■□□□□ 0.52
NUBP1P53384 MTDHP4-201ENST00000600287 670 ntBASIC18.33■□□□□ 0.52
NUBP1P53384 AL138831.2-201ENST00000606564 490 ntBASIC18.33■□□□□ 0.52
NUBP1P53384 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC18.33■□□□□ 0.52
NUBP1P53384 AC133485.6-201ENST00000624045 688 ntBASIC18.33■□□□□ 0.52
NUBP1P53384 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.33■□□□□ 0.52
NUBP1P53384 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
NUBP1P53384 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.33■□□□□ 0.52
NUBP1P53384 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 CASC19-229ENST00000641418 1373 ntBASIC18.32■□□□□ 0.52
NUBP1P53384 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC18.32■□□□□ 0.52
NUBP1P53384 HIKESHI-201ENST00000278483 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 SOD2-201ENST00000337404 991 ntTSL 2 BASIC18.32■□□□□ 0.52
NUBP1P53384 FUOM-202ENST00000368551 628 ntTSL 3 BASIC18.32■□□□□ 0.52
NUBP1P53384 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC18.32■□□□□ 0.52
NUBP1P53384 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.32■□□□□ 0.52
NUBP1P53384 BCRP1-201ENST00000444246 691 ntBASIC18.32■□□□□ 0.52
NUBP1P53384 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC18.32■□□□□ 0.52
NUBP1P53384 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.32■□□□□ 0.52
NUBP1P53384 RPL12P24-201ENST00000474907 486 ntBASIC18.32■□□□□ 0.52
NUBP1P53384 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 AC106028.4-201ENST00000614509 607 ntBASIC18.32■□□□□ 0.52
NUBP1P53384 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
NUBP1P53384 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.32■□□□□ 0.52
NUBP1P53384 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
NUBP1P53384 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC18.32■□□□□ 0.52
NUBP1P53384 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.32■□□□□ 0.52
NUBP1P53384 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NUBP1P53384 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.31■□□□□ 0.52
NUBP1P53384 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NUBP1P53384 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC18.31■□□□□ 0.52
NUBP1P53384 CTNS-203ENST00000399306 803 ntTSL 3 BASIC18.31■□□□□ 0.52
NUBP1P53384 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.31■□□□□ 0.52
NUBP1P53384 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.31■□□□□ 0.52
NUBP1P53384 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.31■□□□□ 0.52
NUBP1P53384 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.31■□□□□ 0.52
NUBP1P53384 PAWRP1-201ENST00000451083 565 ntBASIC18.31■□□□□ 0.52
NUBP1P53384 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 AC090953.1-201ENST00000604305 1092 ntBASIC18.31■□□□□ 0.52
NUBP1P53384 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC18.31■□□□□ 0.52
NUBP1P53384 AC087821.1-201ENST00000623639 567 ntBASIC18.31■□□□□ 0.52
NUBP1P53384 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC18.31■□□□□ 0.52
NUBP1P53384 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NUBP1P53384 SDHAP1-207ENST00000440850 2000 ntBASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms