Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGA2P52926 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.85■□□□□ 0.29
HMGA2P52926 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 CR392000.1-201ENST00000624770 1228 ntBASIC16.85■□□□□ 0.29
HMGA2P52926 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 SDHAP2-201ENST00000455183 2001 ntBASIC16.85■□□□□ 0.29
HMGA2P52926 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGA2P52926 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.85■□□□□ 0.29
HMGA2P52926 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
HMGA2P52926 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
HMGA2P52926 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
HMGA2P52926 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGA2P52926 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 B3GAT3P1-201ENST00000471720 806 ntBASIC16.84■□□□□ 0.29
HMGA2P52926 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
HMGA2P52926 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC16.84■□□□□ 0.29
HMGA2P52926 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 MIR6786-201ENST00000616843 113 ntBASIC16.84■□□□□ 0.29
HMGA2P52926 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC16.84■□□□□ 0.29
HMGA2P52926 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGA2P52926 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGA2P52926 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
HMGA2P52926 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
HMGA2P52926 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.84■□□□□ 0.29
HMGA2P52926 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGA2P52926 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMGA2P52926 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
HMGA2P52926 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
HMGA2P52926 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
HMGA2P52926 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HMGA2P52926 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 MFSD2A-202ENST00000372811 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 GPAT2P1-201ENST00000444924 1672 ntBASIC16.83■□□□□ 0.28
HMGA2P52926 MCCD1P1-208ENST00000445732 328 ntBASIC16.83■□□□□ 0.28
HMGA2P52926 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGA2P52926 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.83■□□□□ 0.28
HMGA2P52926 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.83■□□□□ 0.28
HMGA2P52926 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 AL163051.1-201ENST00000569214 1512 ntBASIC16.83■□□□□ 0.28
HMGA2P52926 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGA2P52926 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HMGA2P52926 AC073195.1-201ENST00000607241 877 ntBASIC16.83■□□□□ 0.28
HMGA2P52926 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.83■□□□□ 0.28
HMGA2P52926 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
HMGA2P52926 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
HMGA2P52926 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
HMGA2P52926 FZD10-202ENST00000539839 3282 ntBASIC16.83■□□□□ 0.28
HMGA2P52926 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
HMGA2P52926 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
HMGA2P52926 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
HMGA2P52926 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC16.82■□□□□ 0.28
HMGA2P52926 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms