Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.3■□□□□ 0.36
SMSP52788 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
SMSP52788 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SMSP52788 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
SMSP52788 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.3■□□□□ 0.36
SMSP52788 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SMSP52788 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.29■□□□□ 0.36
SMSP52788 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC17.29■□□□□ 0.36
SMSP52788 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
SMSP52788 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SMSP52788 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.29■□□□□ 0.36
SMSP52788 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 COX11P1-201ENST00000489116 835 ntBASIC17.29■□□□□ 0.36
SMSP52788 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC17.29■□□□□ 0.36
SMSP52788 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC17.29■□□□□ 0.36
SMSP52788 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SMSP52788 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.29■□□□□ 0.36
SMSP52788 AC139887.4-201ENST00000607877 719 ntBASIC17.29■□□□□ 0.36
SMSP52788 AL031432.5-201ENST00000641059 760 ntBASIC17.29■□□□□ 0.36
SMSP52788 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.29■□□□□ 0.36
SMSP52788 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SMSP52788 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC17.29■□□□□ 0.36
SMSP52788 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SMSP52788 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 NOC2LP1-202ENST00000452600 2235 ntBASIC17.28■□□□□ 0.36
SMSP52788 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SMSP52788 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 TSPY5P-201ENST00000426936 936 ntBASIC17.28■□□□□ 0.36
SMSP52788 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.28■□□□□ 0.36
SMSP52788 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC17.28■□□□□ 0.36
SMSP52788 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC17.28■□□□□ 0.36
SMSP52788 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC17.28■□□□□ 0.36
SMSP52788 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.28■□□□□ 0.36
SMSP52788 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.28■□□□□ 0.36
SMSP52788 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.28■□□□□ 0.36
SMSP52788 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SMSP52788 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SMSP52788 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SMSP52788 AC096733.2-201ENST00000609937 1394 ntBASIC17.28■□□□□ 0.36
SMSP52788 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMSP52788 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.27■□□□□ 0.36
SMSP52788 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMSP52788 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMSP52788 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC17.27■□□□□ 0.36
SMSP52788 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SMSP52788 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 INGX-201ENST00000359239 846 ntBASIC17.27■□□□□ 0.36
SMSP52788 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SMSP52788 AC091390.4-202ENST00000476426 537 ntBASIC17.27■□□□□ 0.36
SMSP52788 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.27■□□□□ 0.36
SMSP52788 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SMSP52788 METTL23-204ENST00000586752 904 ntTSL 2 BASIC17.27■□□□□ 0.36
SMSP52788 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms