Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBP50607 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBP50607 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBP50607 IER3-202ENST00000376377 1350 ntBASIC19.43■□□□□ 0.7
TUBP50607 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
TUBP50607 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.43■□□□□ 0.7
TUBP50607 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
TUBP50607 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
TUBP50607 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.43■□□□□ 0.7
TUBP50607 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBP50607 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.42■□□□□ 0.7
TUBP50607 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.42■□□□□ 0.7
TUBP50607 VENTXP5-201ENST00000523979 775 ntBASIC19.42■□□□□ 0.7
TUBP50607 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC19.42■□□□□ 0.7
TUBP50607 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TUBP50607 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
TUBP50607 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
TUBP50607 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
TUBP50607 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
TUBP50607 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
TUBP50607 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBP50607 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TUBP50607 AC006333.2-201ENST00000607957 2099 ntBASIC19.41■□□□□ 0.7
TUBP50607 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
TUBP50607 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBP50607 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.41■□□□□ 0.7
TUBP50607 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBP50607 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.41■□□□□ 0.7
TUBP50607 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC19.41■□□□□ 0.7
TUBP50607 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
TUBP50607 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
TUBP50607 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
TUBP50607 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.41■□□□□ 0.7
TUBP50607 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.4■□□□□ 0.7
TUBP50607 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.4■□□□□ 0.7
TUBP50607 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.4■□□□□ 0.7
TUBP50607 UPK3BP1-201ENST00000428678 509 ntBASIC19.4■□□□□ 0.7
TUBP50607 SPDYE13P-201ENST00000445314 798 ntBASIC19.4■□□□□ 0.7
TUBP50607 PTK2-216ENST00000519881 863 ntTSL 3 BASIC19.4■□□□□ 0.7
TUBP50607 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
TUBP50607 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC19.4■□□□□ 0.7
TUBP50607 AC010240.3-201ENST00000607688 395 ntBASIC19.4■□□□□ 0.7
TUBP50607 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.4■□□□□ 0.7
TUBP50607 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.4■□□□□ 0.7
TUBP50607 AC083906.6-201ENST00000641366 219 ntBASIC19.4■□□□□ 0.7
TUBP50607 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
TUBP50607 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
TUBP50607 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
TUBP50607 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TUBP50607 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.4■□□□□ 0.7
TUBP50607 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBP50607 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBP50607 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TUBP50607 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBP50607 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
TUBP50607 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms