Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
KRT9P35527 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
KRT9P35527 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
KRT9P35527 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.21■□□□□ 0.83
KRT9P35527 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.21■□□□□ 0.83
KRT9P35527 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
KRT9P35527 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT9P35527 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
KRT9P35527 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT9P35527 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT9P35527 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 AC008040.2-201ENST00000461049 708 ntBASIC20.2■□□□□ 0.82
KRT9P35527 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC20.2■□□□□ 0.82
KRT9P35527 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT9P35527 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT9P35527 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT9P35527 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.2■□□□□ 0.82
KRT9P35527 Z99916.2-201ENST00000604037 246 ntBASIC20.2■□□□□ 0.82
KRT9P35527 AC113410.3-201ENST00000623366 203 ntBASIC20.2■□□□□ 0.82
KRT9P35527 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
KRT9P35527 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
KRT9P35527 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 FLYWCH1P1-201ENST00000460917 1874 ntBASIC20.2■□□□□ 0.82
KRT9P35527 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
KRT9P35527 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT9P35527 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 AC008556.1-201ENST00000610908 2040 ntBASIC20.19■□□□□ 0.82
KRT9P35527 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.19■□□□□ 0.82
KRT9P35527 REXO2-216ENST00000544196 452 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT9P35527 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
KRT9P35527 GRAP-204ENST00000573099 846 ntTSL 3 BASIC20.19■□□□□ 0.82
KRT9P35527 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.19■□□□□ 0.82
KRT9P35527 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
KRT9P35527 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
KRT9P35527 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
KRT9P35527 BCL2-203ENST00000589955 5011 ntBASIC20.18■□□□□ 0.82
KRT9P35527 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 MIR718-201ENST00000390190 70 ntBASIC20.18■□□□□ 0.82
KRT9P35527 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT9P35527 NUDT16P1-203ENST00000513809 620 ntBASIC20.18■□□□□ 0.82
KRT9P35527 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC20.18■□□□□ 0.82
KRT9P35527 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.18■□□□□ 0.82
KRT9P35527 AP006294.2-201ENST00000641667 209 ntBASIC20.18■□□□□ 0.82
KRT9P35527 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KRT9P35527 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.18■□□□□ 0.82
KRT9P35527 AC134043.2-201ENST00000624206 2238 ntBASIC20.18■□□□□ 0.82
KRT9P35527 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms