Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.77■□□□□ 0.6
NFKB1P19838 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.77■□□□□ 0.6
NFKB1P19838 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.77■□□□□ 0.6
NFKB1P19838 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 ESPNP-201ENST00000270691 2015 ntBASIC18.77■□□□□ 0.6
NFKB1P19838 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
NFKB1P19838 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
NFKB1P19838 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.59
NFKB1P19838 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.77■□□□□ 0.59
NFKB1P19838 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NFKB1P19838 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
NFKB1P19838 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
NFKB1P19838 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 KRT8P7-201ENST00000533003 1432 ntBASIC18.76■□□□□ 0.59
NFKB1P19838 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.76■□□□□ 0.59
NFKB1P19838 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.76■□□□□ 0.59
NFKB1P19838 AL163051.1-201ENST00000569214 1512 ntBASIC18.76■□□□□ 0.59
NFKB1P19838 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NFKB1P19838 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC18.76■□□□□ 0.59
NFKB1P19838 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 ABALON-201ENST00000629058 1903 ntBASIC18.76■□□□□ 0.59
NFKB1P19838 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.76■□□□□ 0.59
NFKB1P19838 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
NFKB1P19838 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
NFKB1P19838 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 KRT18P22-201ENST00000402024 1347 ntBASIC18.75■□□□□ 0.59
NFKB1P19838 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
NFKB1P19838 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
NFKB1P19838 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NFKB1P19838 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.75■□□□□ 0.59
NFKB1P19838 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.75■□□□□ 0.59
NFKB1P19838 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 AC145285.6-201ENST00000604632 637 ntBASIC18.75■□□□□ 0.59
NFKB1P19838 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.75■□□□□ 0.59
NFKB1P19838 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.75■□□□□ 0.59
NFKB1P19838 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NFKB1P19838 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.74■□□□□ 0.59
NFKB1P19838 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.74■□□□□ 0.59
NFKB1P19838 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.74■□□□□ 0.59
NFKB1P19838 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
NFKB1P19838 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC18.74■□□□□ 0.59
NFKB1P19838 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.74■□□□□ 0.59
NFKB1P19838 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.74■□□□□ 0.59
NFKB1P19838 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NFKB1P19838 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NFKB1P19838 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms