Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFRAP16234 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.36■□□□□ 0.69
PDGFRAP16234 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
PDGFRAP16234 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.36■□□□□ 0.69
PDGFRAP16234 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
PDGFRAP16234 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 Telomerase-vert.1-201ENST00000363312 438 ntBASIC19.35■□□□□ 0.69
PDGFRAP16234 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.35■□□□□ 0.69
PDGFRAP16234 AC104076.2-201ENST00000448912 469 ntBASIC19.35■□□□□ 0.69
PDGFRAP16234 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.35■□□□□ 0.69
PDGFRAP16234 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.35■□□□□ 0.69
PDGFRAP16234 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 AC006011.2-201ENST00000621313 1158 ntBASIC19.35■□□□□ 0.69
PDGFRAP16234 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.35■□□□□ 0.69
PDGFRAP16234 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 AL163051.1-201ENST00000569214 1512 ntBASIC19.35■□□□□ 0.69
PDGFRAP16234 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
PDGFRAP16234 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC19.35■□□□□ 0.69
PDGFRAP16234 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
PDGFRAP16234 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
PDGFRAP16234 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 HCG11-201ENST00000411553 5696 ntBASIC19.34■□□□□ 0.69
PDGFRAP16234 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
PDGFRAP16234 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
PDGFRAP16234 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC19.34■□□□□ 0.69
PDGFRAP16234 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC19.34■□□□□ 0.69
PDGFRAP16234 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.34■□□□□ 0.69
PDGFRAP16234 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC19.34■□□□□ 0.69
PDGFRAP16234 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC19.34■□□□□ 0.69
PDGFRAP16234 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC19.34■□□□□ 0.69
PDGFRAP16234 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 AC141257.4-201ENST00000634557 245 ntBASIC19.34■□□□□ 0.69
PDGFRAP16234 AC136944.6-201ENST00000634818 245 ntBASIC19.34■□□□□ 0.69
PDGFRAP16234 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
PDGFRAP16234 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.34■□□□□ 0.69
PDGFRAP16234 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.34■□□□□ 0.69
PDGFRAP16234 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
PDGFRAP16234 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.34■□□□□ 0.69
PDGFRAP16234 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
PDGFRAP16234 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.33■□□□□ 0.69
PDGFRAP16234 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.69
PDGFRAP16234 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDGFRAP16234 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDGFRAP16234 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
PDGFRAP16234 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
PDGFRAP16234 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
PDGFRAP16234 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
PDGFRAP16234 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
PDGFRAP16234 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.68
PDGFRAP16234 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms