Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC22.13■■□□□ 1.13
APPP05067 AC093525.10-201ENST00000625130 1569 ntBASIC22.12■■□□□ 1.13
APPP05067 AL031598.1-201ENST00000561511 1773 ntBASIC22.12■■□□□ 1.13
APPP05067 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC22.12■■□□□ 1.13
APPP05067 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC22.12■■□□□ 1.13
APPP05067 AC004408.2-201ENST00000623613 2777 ntBASIC22.12■■□□□ 1.13
APPP05067 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC22.12■■□□□ 1.13
APPP05067 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
APPP05067 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC22.12■■□□□ 1.13
APPP05067 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC22.12■■□□□ 1.13
APPP05067 NT5C-211ENST00000582170 653 ntTSL 3 BASIC22.12■■□□□ 1.13
APPP05067 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
APPP05067 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
APPP05067 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC22.12■■□□□ 1.13
APPP05067 AC112777.1-201ENST00000540175 1423 ntBASIC22.12■■□□□ 1.13
APPP05067 AC093503.3-201ENST00000624917 2352 ntBASIC22.12■■□□□ 1.13
APPP05067 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC22.12■■□□□ 1.13
APPP05067 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
APPP05067 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
APPP05067 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 AP000593.1-201ENST00000393668 712 ntBASIC22.11■■□□□ 1.13
APPP05067 AL671277.2-201ENST00000458060 996 ntBASIC22.11■■□□□ 1.13
APPP05067 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 KRT18P41-201ENST00000518924 1277 ntBASIC22.11■■□□□ 1.13
APPP05067 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC22.11■■□□□ 1.13
APPP05067 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.11■■□□□ 1.13
APPP05067 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
APPP05067 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC22.11■■□□□ 1.13
APPP05067 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC22.11■■□□□ 1.13
APPP05067 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
APPP05067 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
APPP05067 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC22.1■■□□□ 1.13
APPP05067 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC22.1■■□□□ 1.13
APPP05067 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.1■■□□□ 1.13
APPP05067 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC22.1■■□□□ 1.13
APPP05067 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.1■■□□□ 1.13
APPP05067 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
APPP05067 MYC-208ENST00000641036 567 ntBASIC22.1■■□□□ 1.13
APPP05067 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 AC005082.1-201ENST00000413042 2259 ntBASIC22.1■■□□□ 1.13
APPP05067 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
APPP05067 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC22.1■■□□□ 1.13
APPP05067 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC22.1■■□□□ 1.13
APPP05067 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
APPP05067 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
APPP05067 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC22.1■■□□□ 1.13
APPP05067 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
APPP05067 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC22.09■■□□□ 1.13
APPP05067 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC22.09■■□□□ 1.13
APPP05067 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 MYLKP1-201ENST00000509077 1580 ntBASIC22.09■■□□□ 1.13
APPP05067 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.09■■□□□ 1.13
APPP05067 AC092597.1-201ENST00000487352 616 ntBASIC22.09■■□□□ 1.13
APPP05067 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.09■■□□□ 1.13
APPP05067 DFFB-212ENST00000625756 649 ntTSL 5 BASIC22.09■■□□□ 1.13
APPP05067 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
APPP05067 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
APPP05067 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
APPP05067 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
APPP05067 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms