Protein–RNA interactions for Protein: P02545

LMNA, Prelamin-A/C, humanhuman

Known RBP Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNAP02545 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LMNAP02545 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNAP02545 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.25■□□□□ 0.67
LMNAP02545 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 LINC01711-201ENST00000598340 967 ntBASIC19.25■□□□□ 0.67
LMNAP02545 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
LMNAP02545 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.25■□□□□ 0.67
LMNAP02545 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LMNAP02545 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNAP02545 SPDYE15P-201ENST00000424157 909 ntBASIC19.24■□□□□ 0.67
LMNAP02545 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.24■□□□□ 0.67
LMNAP02545 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 AL662844.1-201ENST00000546340 181 ntBASIC19.24■□□□□ 0.67
LMNAP02545 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.24■□□□□ 0.67
LMNAP02545 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNAP02545 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
LMNAP02545 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
LMNAP02545 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNAP02545 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.24■□□□□ 0.67
LMNAP02545 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.24■□□□□ 0.67
LMNAP02545 AC135050.7-201ENST00000624508 2218 ntBASIC19.24■□□□□ 0.67
LMNAP02545 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
LMNAP02545 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
LMNAP02545 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC19.23■□□□□ 0.67
LMNAP02545 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LMNAP02545 Z85996.1-201ENST00000494644 937 ntBASIC19.23■□□□□ 0.67
LMNAP02545 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 NT5C-210ENST00000582160 860 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.23■□□□□ 0.67
LMNAP02545 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
LMNAP02545 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
LMNAP02545 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.23■□□□□ 0.67
LMNAP02545 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC19.23■□□□□ 0.67
LMNAP02545 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNAP02545 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNAP02545 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNAP02545 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNAP02545 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
LMNAP02545 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
LMNAP02545 AC016734.2-201ENST00000624325 1377 ntBASIC19.22■□□□□ 0.67
LMNAP02545 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
LMNAP02545 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms