Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC16.4■□□□□ 0.22
CNOT4O95628 TOLLIP-AS1-201ENST00000530897 939 ntBASIC16.4■□□□□ 0.22
CNOT4O95628 KRT126P-201ENST00000549467 1181 ntBASIC16.4■□□□□ 0.22
CNOT4O95628 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.4■□□□□ 0.22
CNOT4O95628 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.4■□□□□ 0.22
CNOT4O95628 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CNOT4O95628 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CNOT4O95628 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CNOT4O95628 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CNOT4O95628 AP000974.1-201ENST00000623909 2387 ntBASIC16.4■□□□□ 0.22
CNOT4O95628 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.39■□□□□ 0.22
CNOT4O95628 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 SEC1P-202ENST00000473944 940 ntBASIC16.39■□□□□ 0.21
CNOT4O95628 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
CNOT4O95628 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
CNOT4O95628 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.39■□□□□ 0.21
CNOT4O95628 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CNOT4O95628 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CNOT4O95628 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC16.38■□□□□ 0.21
CNOT4O95628 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CNOT4O95628 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC16.38■□□□□ 0.21
CNOT4O95628 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.38■□□□□ 0.21
CNOT4O95628 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CNOT4O95628 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.38■□□□□ 0.21
CNOT4O95628 TPM4P1-201ENST00000436100 807 ntBASIC16.38■□□□□ 0.21
CNOT4O95628 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.38■□□□□ 0.21
CNOT4O95628 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.38■□□□□ 0.21
CNOT4O95628 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC16.38■□□□□ 0.21
CNOT4O95628 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.38■□□□□ 0.21
CNOT4O95628 PDCD2L-203ENST00000587065 492 ntTSL 3 BASIC16.38■□□□□ 0.21
CNOT4O95628 AL121894.2-201ENST00000602977 491 ntBASIC16.38■□□□□ 0.21
CNOT4O95628 AC024243.1-201ENST00000609234 778 ntBASIC16.38■□□□□ 0.21
CNOT4O95628 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC16.38■□□□□ 0.21
CNOT4O95628 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.38■□□□□ 0.21
CNOT4O95628 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
CNOT4O95628 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC16.38■□□□□ 0.21
CNOT4O95628 Z98044.1-201ENST00000632503 1764 ntBASIC16.38■□□□□ 0.21
CNOT4O95628 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CNOT4O95628 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.38■□□□□ 0.21
CNOT4O95628 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CNOT4O95628 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 NFYC-AS1-201ENST00000606277 1687 ntBASIC16.37■□□□□ 0.21
CNOT4O95628 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CNOT4O95628 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms