Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
USP1O94782 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 MIR564-202ENST00000385049 94 ntBASIC18.69■□□□□ 0.58
USP1O94782 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC18.69■□□□□ 0.58
USP1O94782 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.69■□□□□ 0.58
USP1O94782 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 MCCD1P1-208ENST00000445732 328 ntBASIC18.69■□□□□ 0.58
USP1O94782 AC097488.1-201ENST00000507834 756 ntBASIC18.69■□□□□ 0.58
USP1O94782 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.69■□□□□ 0.58
USP1O94782 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.69■□□□□ 0.58
USP1O94782 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 GPAT2P1-201ENST00000444924 1672 ntBASIC18.69■□□□□ 0.58
USP1O94782 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
USP1O94782 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC18.69■□□□□ 0.58
USP1O94782 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
USP1O94782 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.68■□□□□ 0.58
USP1O94782 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 AL596275.1-201ENST00000423464 877 ntBASIC18.68■□□□□ 0.58
USP1O94782 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.68■□□□□ 0.58
USP1O94782 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.68■□□□□ 0.58
USP1O94782 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.68■□□□□ 0.58
USP1O94782 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.68■□□□□ 0.58
USP1O94782 REXO1L10P-201ENST00000615707 1290 ntBASIC18.68■□□□□ 0.58
USP1O94782 REXO1L12P-201ENST00000622156 912 ntBASIC18.68■□□□□ 0.58
USP1O94782 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
USP1O94782 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP1O94782 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
USP1O94782 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
USP1O94782 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.68■□□□□ 0.58
USP1O94782 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
USP1O94782 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 AC135776.1-201ENST00000319817 2481 ntBASIC18.67■□□□□ 0.58
USP1O94782 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC18.67■□□□□ 0.58
USP1O94782 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 AP000593.1-201ENST00000393668 712 ntBASIC18.67■□□□□ 0.58
USP1O94782 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.67■□□□□ 0.58
USP1O94782 Z99916.2-201ENST00000604037 246 ntBASIC18.67■□□□□ 0.58
USP1O94782 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.67■□□□□ 0.58
USP1O94782 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC18.67■□□□□ 0.58
USP1O94782 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
USP1O94782 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.67■□□□□ 0.58
USP1O94782 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
USP1O94782 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
USP1O94782 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 FDX2-206ENST00000492239 773 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 CYGB-204ENST00000589342 815 ntTSL 3 BASIC18.66■□□□□ 0.58
USP1O94782 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
USP1O94782 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.66■□□□□ 0.58
USP1O94782 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.66■□□□□ 0.58
USP1O94782 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
USP1O94782 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms