Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT3HO75486 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SUPT3HO75486 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SUPT3HO75486 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT3HO75486 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC18.31■□□□□ 0.52
SUPT3HO75486 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
SUPT3HO75486 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT3HO75486 AC112777.1-201ENST00000540175 1423 ntBASIC18.31■□□□□ 0.52
SUPT3HO75486 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT3HO75486 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT3HO75486 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.31■□□□□ 0.52
SUPT3HO75486 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
SUPT3HO75486 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SUPT3HO75486 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
SUPT3HO75486 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.3■□□□□ 0.52
SUPT3HO75486 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.3■□□□□ 0.52
SUPT3HO75486 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC18.3■□□□□ 0.52
SUPT3HO75486 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.3■□□□□ 0.52
SUPT3HO75486 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SUPT3HO75486 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.3■□□□□ 0.52
SUPT3HO75486 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SUPT3HO75486 AC098590.1-201ENST00000468126 897 ntBASIC18.3■□□□□ 0.52
SUPT3HO75486 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.3■□□□□ 0.52
SUPT3HO75486 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
SUPT3HO75486 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.3■□□□□ 0.52
SUPT3HO75486 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
SUPT3HO75486 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
SUPT3HO75486 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
SUPT3HO75486 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SUPT3HO75486 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.29■□□□□ 0.52
SUPT3HO75486 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
SUPT3HO75486 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
SUPT3HO75486 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.29■□□□□ 0.52
SUPT3HO75486 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.29■□□□□ 0.52
SUPT3HO75486 SLC25A1P4-201ENST00000567977 778 ntBASIC18.29■□□□□ 0.52
SUPT3HO75486 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.29■□□□□ 0.52
SUPT3HO75486 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
SUPT3HO75486 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.29■□□□□ 0.52
SUPT3HO75486 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.29■□□□□ 0.52
SUPT3HO75486 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
SUPT3HO75486 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
SUPT3HO75486 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SUPT3HO75486 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.28■□□□□ 0.52
SUPT3HO75486 ABALON-201ENST00000629058 1903 ntBASIC18.28■□□□□ 0.52
SUPT3HO75486 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
SUPT3HO75486 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.28■□□□□ 0.52
SUPT3HO75486 MFAP1P1-201ENST00000442257 1255 ntBASIC18.28■□□□□ 0.52
SUPT3HO75486 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC18.28■□□□□ 0.52
SUPT3HO75486 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.28■□□□□ 0.52
SUPT3HO75486 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC18.28■□□□□ 0.52
SUPT3HO75486 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 KRT8P45-201ENST00000414328 1447 ntBASIC18.28■□□□□ 0.52
SUPT3HO75486 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC18.28■□□□□ 0.52
SUPT3HO75486 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
SUPT3HO75486 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.28■□□□□ 0.52
SUPT3HO75486 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
SUPT3HO75486 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.28■□□□□ 0.52
SUPT3HO75486 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.28■□□□□ 0.52
SUPT3HO75486 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
SUPT3HO75486 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SUPT3HO75486 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms