Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
ZNF253O75346 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ZNF253O75346 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
ZNF253O75346 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF253O75346 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.38□□□□□ -0.11
ZNF253O75346 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 GLRB-205ENST00000512619 728 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF253O75346 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC14.38□□□□□ -0.11
ZNF253O75346 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.38□□□□□ -0.11
ZNF253O75346 AC133041.1-202ENST00000642053 222 ntBASIC14.38□□□□□ -0.11
ZNF253O75346 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
ZNF253O75346 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC14.38□□□□□ -0.11
ZNF253O75346 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF253O75346 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF253O75346 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF253O75346 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
ZNF253O75346 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.38□□□□□ -0.11
ZNF253O75346 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
ZNF253O75346 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 POM121L13P-201ENST00000422362 380 ntBASIC14.37□□□□□ -0.11
ZNF253O75346 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF253O75346 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 UNC93B4-201ENST00000505679 747 ntBASIC14.37□□□□□ -0.11
ZNF253O75346 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC14.37□□□□□ -0.11
ZNF253O75346 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 WT1-AS_3.1-201ENST00000613262 234 ntBASIC14.37□□□□□ -0.11
ZNF253O75346 HLA-A-209ENST00000638375 975 ntBASIC14.37□□□□□ -0.11
ZNF253O75346 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC14.37□□□□□ -0.11
ZNF253O75346 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
ZNF253O75346 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
ZNF253O75346 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC14.37□□□□□ -0.11
ZNF253O75346 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF253O75346 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF253O75346 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF253O75346 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC14.36□□□□□ -0.11
ZNF253O75346 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.36□□□□□ -0.11
ZNF253O75346 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 AC084018.2-201ENST00000613093 2607 ntBASIC14.36□□□□□ -0.11
ZNF253O75346 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ZNF253O75346 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.36□□□□□ -0.11
ZNF253O75346 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
ZNF253O75346 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
ZNF253O75346 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms