Protein–RNA interactions for Protein: O60563

CCNT1, Cyclin-T1, humanhuman

Known RBP Predictions only

Length 726 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1O60563 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CCNT1O60563 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCNT1O60563 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CCNT1O60563 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNT1O60563 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNT1O60563 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
CCNT1O60563 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCNT1O60563 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCNT1O60563 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNT1O60563 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCNT1O60563 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.95■□□□□ 0.94
CCNT1O60563 MIR3180-4-201ENST00000582223 153 ntBASIC20.95■□□□□ 0.94
CCNT1O60563 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
CCNT1O60563 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CCNT1O60563 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.95■□□□□ 0.94
CCNT1O60563 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
CCNT1O60563 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCNT1O60563 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC20.94■□□□□ 0.94
CCNT1O60563 AC009102.3-201ENST00000623118 1491 ntBASIC20.94■□□□□ 0.94
CCNT1O60563 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 SDHAP2-201ENST00000455183 2001 ntBASIC20.94■□□□□ 0.94
CCNT1O60563 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.94■□□□□ 0.94
CCNT1O60563 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 MIR149-201ENST00000384879 89 ntBASIC20.94■□□□□ 0.94
CCNT1O60563 DUX4L26-201ENST00000489078 1255 ntBASIC20.94■□□□□ 0.94
CCNT1O60563 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.94■□□□□ 0.94
CCNT1O60563 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.94■□□□□ 0.94
CCNT1O60563 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC20.94■□□□□ 0.94
CCNT1O60563 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCNT1O60563 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.93■□□□□ 0.94
CCNT1O60563 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC20.93■□□□□ 0.94
CCNT1O60563 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCNT1O60563 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCNT1O60563 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCNT1O60563 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.93■□□□□ 0.94
CCNT1O60563 AC034232.1-201ENST00000506026 1064 ntBASIC20.93■□□□□ 0.94
CCNT1O60563 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNT1O60563 AC009065.1-201ENST00000564055 1225 ntBASIC20.93■□□□□ 0.94
CCNT1O60563 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.93■□□□□ 0.94
CCNT1O60563 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC20.93■□□□□ 0.94
CCNT1O60563 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.93■□□□□ 0.94
CCNT1O60563 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.93■□□□□ 0.94
CCNT1O60563 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCNT1O60563 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCNT1O60563 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
CCNT1O60563 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.92■□□□□ 0.94
CCNT1O60563 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCNT1O60563 SPDYE15P-201ENST00000424157 909 ntBASIC20.92■□□□□ 0.94
CCNT1O60563 RASA4DP-201ENST00000460726 1199 ntBASIC20.92■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms