Protein–RNA interactions for Protein: O14493

CLDN4, Claudin-4, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4O14493 AL590326.2-201ENST00000625139 305 ntBASIC17.39■□□□□ 0.37
CLDN4O14493 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN4O14493 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN4O14493 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.39■□□□□ 0.37
CLDN4O14493 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CLDN4O14493 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 AC093503.3-201ENST00000624917 2352 ntBASIC17.38■□□□□ 0.37
CLDN4O14493 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 AL163051.1-201ENST00000569214 1512 ntBASIC17.38■□□□□ 0.37
CLDN4O14493 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
CLDN4O14493 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC17.38■□□□□ 0.37
CLDN4O14493 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN4O14493 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN4O14493 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.38■□□□□ 0.37
CLDN4O14493 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.38■□□□□ 0.37
CLDN4O14493 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CLDN4O14493 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.38■□□□□ 0.37
CLDN4O14493 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN4O14493 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN4O14493 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN4O14493 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN4O14493 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 AC022616.7-201ENST00000525383 220 ntBASIC17.37■□□□□ 0.37
CLDN4O14493 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN4O14493 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 AL499627.1-201ENST00000569373 2188 ntBASIC17.37■□□□□ 0.37
CLDN4O14493 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.37■□□□□ 0.37
CLDN4O14493 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.37■□□□□ 0.37
CLDN4O14493 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLDN4O14493 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
CLDN4O14493 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLDN4O14493 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.36■□□□□ 0.37
CLDN4O14493 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 FAM8A6P-201ENST00000407496 1135 ntBASIC17.36■□□□□ 0.37
CLDN4O14493 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 RASA4DP-201ENST00000460726 1199 ntBASIC17.36■□□□□ 0.37
CLDN4O14493 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLDN4O14493 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLDN4O14493 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLDN4O14493 AC004408.2-201ENST00000623613 2777 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms