Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.73■□□□□ 0.91
DDX39AO00148 MYLKP1-201ENST00000509077 1580 ntBASIC20.73■□□□□ 0.91
DDX39AO00148 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 RNF126P1-202ENST00000569893 925 ntBASIC20.73■□□□□ 0.91
DDX39AO00148 MIR3180-4-201ENST00000582223 153 ntBASIC20.73■□□□□ 0.91
DDX39AO00148 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX39AO00148 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX39AO00148 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX39AO00148 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX39AO00148 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.73■□□□□ 0.91
DDX39AO00148 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
DDX39AO00148 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
DDX39AO00148 MIR662-201ENST00000384847 95 ntBASIC20.72■□□□□ 0.91
DDX39AO00148 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX39AO00148 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX39AO00148 REEP1-209ENST00000541910 969 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX39AO00148 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC20.72■□□□□ 0.91
DDX39AO00148 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX39AO00148 AC011498.5-201ENST00000592027 486 ntBASIC20.72■□□□□ 0.91
DDX39AO00148 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.72■□□□□ 0.91
DDX39AO00148 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
DDX39AO00148 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX39AO00148 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.72■□□□□ 0.91
DDX39AO00148 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.72■□□□□ 0.91
DDX39AO00148 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX39AO00148 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
DDX39AO00148 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.72■□□□□ 0.91
DDX39AO00148 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
DDX39AO00148 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 CROCCP3-202ENST00000420820 1947 ntBASIC20.71■□□□□ 0.91
DDX39AO00148 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 PLAC8-202ENST00000411416 786 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC20.71■□□□□ 0.91
DDX39AO00148 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC20.71■□□□□ 0.91
DDX39AO00148 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 LITAF-220ENST00000620789 692 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX39AO00148 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
DDX39AO00148 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
DDX39AO00148 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.71■□□□□ 0.91
DDX39AO00148 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 AC112777.1-201ENST00000540175 1423 ntBASIC20.7■□□□□ 0.9
DDX39AO00148 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
DDX39AO00148 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
DDX39AO00148 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
DDX39AO00148 AC009065.1-201ENST00000564055 1225 ntBASIC20.7■□□□□ 0.9
DDX39AO00148 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX39AO00148 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX39AO00148 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC20.7■□□□□ 0.9
DDX39AO00148 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
DDX39AO00148 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC20.7■□□□□ 0.9
DDX39AO00148 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
DDX39AO00148 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.69■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms