Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 ANKRD20A18P-201ENST00000359341 492 ntBASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 TK2-213ENST00000563369 882 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CCDC196A0A1B0GTZ2 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 HCG11-201ENST00000411553 5696 ntBASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 BCL2-203ENST00000589955 5011 ntBASIC21.46■■□□□ 1.03
CCDC196A0A1B0GTZ2 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC034232.1-201ENST00000506026 1064 ntBASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 MIR3917-201ENST00000580971 93 ntBASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
CCDC196A0A1B0GTZ2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 AL162741.1-201ENST00000565563 1558 ntBASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 GCSHP2-201ENST00000560971 527 ntBASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 AL023973.1-201ENST00000624619 620 ntBASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 SDHAP2-201ENST00000455183 2001 ntBASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCDC196A0A1B0GTZ2 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 EFTUD1P1-204ENST00000560401 1798 ntBASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
CCDC196A0A1B0GTZ2 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms