Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC21.11■□□□□ 0.97
PCDHA4Q9UN74 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 STARP1-201ENST00000397973 869 ntBASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 SNX5-210ENST00000481323 562 ntTSL 3 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 DUX4L26-201ENST00000489078 1255 ntBASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
PCDHA4Q9UN74 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 HOMER2P1-201ENST00000455653 964 ntBASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 AC063952.2-201ENST00000498792 1227 ntBASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC21.09■□□□□ 0.97
PCDHA4Q9UN74 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 KRT18P38-201ENST00000449496 1282 ntBASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 REEP1-209ENST00000541910 969 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 LTBR-211ENST00000543190 785 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDHA4Q9UN74 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDHA4Q9UN74 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC21.08■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms