Protein–RNA interactions for Protein: Q9UM47

NOTCH3, Neurogenic locus notch homolog protein 3, humanhuman

Predictions only

Length 2,321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3Q9UM47 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 AL157888.1-201ENST00000631930 593 ntBASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 KRT18P1-202ENST00000452408 1331 ntBASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 GOLGA2P11-201ENST00000562660 1621 ntBASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
NOTCH3Q9UM47 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 SLC25A6P4-201ENST00000586535 553 ntBASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 AL158211.5-201ENST00000623583 2518 ntBASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 TEX30-205ENST00000376029 959 ntTSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 AC125437.2-201ENST00000625180 2167 ntBASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NOTCH3Q9UM47 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 LINC00167-201ENST00000530583 1419 ntBASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 TSPY19P-201ENST00000418461 509 ntBASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 TSPY18P-201ENST00000441642 509 ntBASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AC024243.1-201ENST00000609234 778 ntBASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AC139530.3-201ENST00000620344 690 ntBASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 PPIH-202ENST00000372549 327 ntTSL 3 BASIC14.25□□□□□ -0.13
NOTCH3Q9UM47 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms