Protein–RNA interactions for Protein: Q9UH90

FBXO40, F-box only protein 40, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO40Q9UH90 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
FBXO40Q9UH90 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 KRT16P4-201ENST00000453883 522 ntBASIC20.96■□□□□ 0.95
FBXO40Q9UH90 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 AL160237.2-201ENST00000556165 472 ntBASIC20.96■□□□□ 0.95
FBXO40Q9UH90 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 AC104692.2-201ENST00000603054 253 ntBASIC20.96■□□□□ 0.95
FBXO40Q9UH90 AL353801.3-201ENST00000609898 542 ntBASIC20.96■□□□□ 0.95
FBXO40Q9UH90 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
FBXO40Q9UH90 AC112777.1-201ENST00000540175 1423 ntBASIC20.95■□□□□ 0.95
FBXO40Q9UH90 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 SLC25A24-204ENST00000569674 2357 ntBASIC20.95■□□□□ 0.94
FBXO40Q9UH90 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 DFFB-203ENST00000341385 572 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 CCNC-219ENST00000627680 896 ntTSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.95■□□□□ 0.94
FBXO40Q9UH90 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 BET1L-206ENST00000486280 665 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 AP005901.3-202ENST00000581653 237 ntBASIC20.94■□□□□ 0.94
FBXO40Q9UH90 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
FBXO40Q9UH90 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.93■□□□□ 0.94
FBXO40Q9UH90 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms