Protein–RNA interactions for Protein: Q9UBX1

CTSF, Cathepsin F, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSFQ9UBX1 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CTSFQ9UBX1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 RNF126P1-202ENST00000569893 925 ntBASIC17.36■□□□□ 0.37
CTSFQ9UBX1 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC17.36■□□□□ 0.37
CTSFQ9UBX1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 AL499627.1-201ENST00000569373 2188 ntBASIC17.36■□□□□ 0.37
CTSFQ9UBX1 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 AC093525.10-201ENST00000625130 1569 ntBASIC17.36■□□□□ 0.37
CTSFQ9UBX1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CTSFQ9UBX1 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AP000593.1-201ENST00000393668 712 ntBASIC17.35■□□□□ 0.37
CTSFQ9UBX1 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AC009065.1-201ENST00000564055 1225 ntBASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AL163051.1-201ENST00000569214 1512 ntBASIC17.35■□□□□ 0.37
CTSFQ9UBX1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.35■□□□□ 0.37
CTSFQ9UBX1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 BX276092.5-203ENST00000456199 560 ntBASIC17.34■□□□□ 0.37
CTSFQ9UBX1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
CTSFQ9UBX1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms