Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 REXO1L9P-201ENST00000604264 2108 ntBASIC17.62■□□□□ 0.41
VCX3BQ9H321 CCDC74A-201ENST00000295171 1543 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
VCX3BQ9H321 CCDC74B-201ENST00000310463 1549 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
VCX3BQ9H321 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 TTBK1-201ENST00000259750 6932 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 TPR-209ENST00000613151 2478 ntTSL 5 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 POR-209ENST00000439269 1858 ntTSL 2 BASIC17.61■□□□□ 0.41
VCX3BQ9H321 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
VCX3BQ9H321 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 AL136162.1-201ENST00000607711 1078 ntBASIC17.6■□□□□ 0.41
VCX3BQ9H321 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 AC135279.3-201ENST00000610945 1311 ntBASIC17.6■□□□□ 0.41
VCX3BQ9H321 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
VCX3BQ9H321 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
VCX3BQ9H321 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
VCX3BQ9H321 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
VCX3BQ9H321 RARRES2P1-201ENST00000474487 481 ntBASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms