Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 SNCG-201ENST00000348795 684 ntTSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC073195.1-201ENST00000607241 877 ntBASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 ESPNP-201ENST00000270691 2015 ntBASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 AP000997.3-201ENST00000623333 2250 ntBASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 GNAS-203ENST00000306120 1878 ntBASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC14.25□□□□□ -0.13
SHANK2-AS3Q9BTD1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 AF186192.3-201ENST00000583427 947 ntBASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 MIR6786-201ENST00000616843 113 ntBASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
SHANK2-AS3Q9BTD1 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 B3GAT3P1-201ENST00000471720 806 ntBASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC011506.1-201ENST00000474329 610 ntBASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 RARRES2P10-201ENST00000564312 460 ntBASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
SHANK2-AS3Q9BTD1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms