Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS2Q99743 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS2Q99743 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS2Q99743 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS2Q99743 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NPAS2Q99743 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS2Q99743 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS2Q99743 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.11■□□□□ 0.49
NPAS2Q99743 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS2Q99743 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS2Q99743 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NPAS2Q99743 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.11■□□□□ 0.49
NPAS2Q99743 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
NPAS2Q99743 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NPAS2Q99743 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.1■□□□□ 0.49
NPAS2Q99743 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS2Q99743 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
NPAS2Q99743 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS2Q99743 TUBB8P6-201ENST00000436895 1288 ntBASIC18.1■□□□□ 0.49
NPAS2Q99743 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.1■□□□□ 0.49
NPAS2Q99743 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS2Q99743 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS2Q99743 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC18.1■□□□□ 0.49
NPAS2Q99743 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS2Q99743 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC18.1■□□□□ 0.49
NPAS2Q99743 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 AL499627.1-201ENST00000569373 2188 ntBASIC18.1■□□□□ 0.49
NPAS2Q99743 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC18.1■□□□□ 0.49
NPAS2Q99743 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NPAS2Q99743 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS2Q99743 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS2Q99743 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.09■□□□□ 0.49
NPAS2Q99743 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
NPAS2Q99743 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.09■□□□□ 0.49
NPAS2Q99743 KRT16P1-201ENST00000399124 1418 ntBASIC18.09■□□□□ 0.49
NPAS2Q99743 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 AC012313.1-201ENST00000593393 3059 ntBASIC18.09■□□□□ 0.49
NPAS2Q99743 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NPAS2Q99743 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC18.09■□□□□ 0.49
NPAS2Q99743 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.09■□□□□ 0.49
NPAS2Q99743 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
NPAS2Q99743 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NPAS2Q99743 ESPNP-201ENST00000270691 2015 ntBASIC18.09■□□□□ 0.49
NPAS2Q99743 HTR7P1-202ENST00000624664 4411 ntBASIC18.09■□□□□ 0.49
NPAS2Q99743 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NPAS2Q99743 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NPAS2Q99743 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.08■□□□□ 0.49
NPAS2Q99743 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS2Q99743 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
NPAS2Q99743 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS2Q99743 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.49
NPAS2Q99743 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS2Q99743 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
NPAS2Q99743 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.08■□□□□ 0.48
NPAS2Q99743 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
NPAS2Q99743 RBM17P1-201ENST00000453646 1190 ntBASIC18.08■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms