Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.48■□□□□ 0.39
COL21A1Q96P44 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
COL21A1Q96P44 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 C2orf69P3-201ENST00000565542 1120 ntBASIC17.47■□□□□ 0.39
COL21A1Q96P44 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
COL21A1Q96P44 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.47■□□□□ 0.39
COL21A1Q96P44 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 CA15P1-201ENST00000481698 905 ntBASIC17.46■□□□□ 0.39
COL21A1Q96P44 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 AC073912.3-201ENST00000624414 853 ntBASIC17.46■□□□□ 0.39
COL21A1Q96P44 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC17.46■□□□□ 0.39
COL21A1Q96P44 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
COL21A1Q96P44 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL21A1Q96P44 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COL21A1Q96P44 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
COL21A1Q96P44 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COL21A1Q96P44 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
COL21A1Q96P44 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
COL21A1Q96P44 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
COL21A1Q96P44 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.45■□□□□ 0.38
COL21A1Q96P44 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms