Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE2Q96FN4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 AC004951.3-201ENST00000418645 1148 ntBASIC16.07■□□□□ 0.16
CPNE2Q96FN4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 KRT16P1-201ENST00000399124 1418 ntBASIC16.07■□□□□ 0.16
CPNE2Q96FN4 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPNE2Q96FN4 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ISG20-202ENST00000379224 540 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ESRRAP1-201ENST00000400596 1257 ntBASIC16.06■□□□□ 0.16
CPNE2Q96FN4 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 AC004980.1-204ENST00000429707 299 ntBASIC16.06■□□□□ 0.16
CPNE2Q96FN4 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE2Q96FN4 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 MTMR9LP-203ENST00000426597 1545 ntBASIC16.05■□□□□ 0.16
CPNE2Q96FN4 KRT8P45-201ENST00000414328 1447 ntBASIC16.05■□□□□ 0.16
CPNE2Q96FN4 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 ATP2C1-218ENST00000510168 5067 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 ID1-201ENST00000376105 1233 ntBASIC16.05■□□□□ 0.16
CPNE2Q96FN4 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE2Q96FN4 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms