Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC39Q96DD0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC39Q96DD0 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
LRRC39Q96DD0 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC18.68■□□□□ 0.58
LRRC39Q96DD0 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
LRRC39Q96DD0 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 NUDT16P1-203ENST00000513809 620 ntBASIC18.66■□□□□ 0.58
LRRC39Q96DD0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 MIR3180-5-201ENST00000583743 153 ntBASIC18.66■□□□□ 0.58
LRRC39Q96DD0 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 AP000997.3-201ENST00000623333 2250 ntBASIC18.66■□□□□ 0.58
LRRC39Q96DD0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
LRRC39Q96DD0 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 SLC25A1P4-201ENST00000567977 778 ntBASIC18.65■□□□□ 0.58
LRRC39Q96DD0 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
LRRC39Q96DD0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC39Q96DD0 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
LRRC39Q96DD0 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.58
LRRC39Q96DD0 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC39Q96DD0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
LRRC39Q96DD0 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.64■□□□□ 0.58
LRRC39Q96DD0 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.64■□□□□ 0.57
LRRC39Q96DD0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms