Protein–RNA interactions for Protein: Q969H4

CNKSR1, Connector enhancer of kinase suppressor of ras 1, humanhuman

Predictions only

Length 720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1Q969H4 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.57■■□□□ 1.2
CNKSR1Q969H4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 HEIH-201ENST00000623091 1652 ntBASIC22.56■■□□□ 1.2
CNKSR1Q969H4 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
CNKSR1Q969H4 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 LBH-204ENST00000406087 559 ntTSL 4 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 AC098831.1-202ENST00000438821 336 ntBASIC22.55■■□□□ 1.2
CNKSR1Q969H4 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 AC034105.1-201ENST00000563488 319 ntBASIC22.55■■□□□ 1.2
CNKSR1Q969H4 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 AC011467.2-201ENST00000598425 242 ntBASIC22.55■■□□□ 1.2
CNKSR1Q969H4 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC22.55■■□□□ 1.2
CNKSR1Q969H4 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 HLA-J-201ENST00000462773 1622 ntBASIC22.55■■□□□ 1.2
CNKSR1Q969H4 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
CNKSR1Q969H4 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 MIR149-201ENST00000384879 89 ntBASIC22.54■■□□□ 1.2
CNKSR1Q969H4 RPS2P1-201ENST00000434010 821 ntBASIC22.54■■□□□ 1.2
CNKSR1Q969H4 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 SART3-203ENST00000546611 1184 ntBASIC22.54■■□□□ 1.2
CNKSR1Q969H4 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 AL138831.2-201ENST00000606564 490 ntBASIC22.54■■□□□ 1.2
CNKSR1Q969H4 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
CNKSR1Q969H4 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 HMGN1P19-201ENST00000436976 333 ntBASIC22.53■■□□□ 1.2
CNKSR1Q969H4 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 NMU-202ENST00000505262 693 ntTSL 3 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 AL139424.1-201ENST00000607572 797 ntBASIC22.53■■□□□ 1.2
CNKSR1Q969H4 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
CNKSR1Q969H4 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
CNKSR1Q969H4 ASL-204ENST00000395331 1538 ntTSL 5 BASIC22.52■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 52 ms