Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 BAALC-201ENST00000297574 801 ntTSL 3 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 KRT18P41-201ENST00000518924 1277 ntBASIC16.62■□□□□ 0.25
PTP4A1Q93096 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 AL109659.2-201ENST00000606809 1674 ntBASIC16.62■□□□□ 0.25
PTP4A1Q93096 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
PTP4A1Q93096 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
PTP4A1Q93096 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 REXO1L9P-201ENST00000604264 2108 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AC011506.1-201ENST00000474329 610 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AC073195.1-201ENST00000607241 877 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 AP001412.1-201ENST00000608405 714 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 AC011298.2-201ENST00000617989 482 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 CR392000.1-201ENST00000624770 1228 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 AP006294.2-201ENST00000641667 209 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 AL031985.4-201ENST00000642138 673 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
PTP4A1Q93096 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 KRT16P1-201ENST00000399124 1418 ntBASIC16.61■□□□□ 0.25
PTP4A1Q93096 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
PTP4A1Q93096 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 SLC25A6P5-201ENST00000435663 894 ntBASIC16.6■□□□□ 0.25
PTP4A1Q93096 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 AF186192.3-201ENST00000583427 947 ntBASIC16.6■□□□□ 0.25
PTP4A1Q93096 MME-217ENST00000616757 1315 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
PTP4A1Q93096 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
PTP4A1Q93096 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms