Protein–RNA interactions for Protein: Q8WVM7

STAG1, Cohesin subunit SA-1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STAG1Q8WVM7 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 IER3-202ENST00000376377 1350 ntBASIC21.73■■□□□ 1.07
STAG1Q8WVM7 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC21.73■■□□□ 1.07
STAG1Q8WVM7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 AC116407.4-201ENST00000623319 1061 ntBASIC21.72■■□□□ 1.07
STAG1Q8WVM7 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
STAG1Q8WVM7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.71■■□□□ 1.07
STAG1Q8WVM7 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.07
STAG1Q8WVM7 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC21.7■■□□□ 1.07
STAG1Q8WVM7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 MIR662-201ENST00000384847 95 ntBASIC21.7■■□□□ 1.06
STAG1Q8WVM7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 AL024508.2-201ENST00000607749 1894 ntBASIC21.7■■□□□ 1.06
STAG1Q8WVM7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.7■■□□□ 1.06
STAG1Q8WVM7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC21.7■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms