Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 NSUN5P1-202ENST00000421140 1535 ntBASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 NSUN5P2-203ENST00000457352 1529 ntBASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
SYNPOQ8N3V7 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 AL353692.3-201ENST00000407031 1396 ntBASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SYNPOQ8N3V7 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AKR1C7P-201ENST00000305623 895 ntBASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC011840.4-201ENST00000578471 627 ntBASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC005332.7-201ENST00000614046 2005 ntBASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SYNPOQ8N3V7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 AC120114.3-201ENST00000611923 658 ntBASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
SYNPOQ8N3V7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms