Protein–RNA interactions for Protein: Q8IV32

CCDC71, Coiled-coil domain-containing protein 71, humanhuman

Predicted RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC71Q8IV32 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
CCDC71Q8IV32 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 AC139713.2-201ENST00000641328 2723 ntBASIC17.33■□□□□ 0.36
CCDC71Q8IV32 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 EGLN1P1-201ENST00000531623 762 ntBASIC17.33■□□□□ 0.36
CCDC71Q8IV32 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 DGCR10-201ENST00000609839 495 ntBASIC17.33■□□□□ 0.36
CCDC71Q8IV32 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 GATB-213ENST00000515812 1893 ntTSL 5 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
CCDC71Q8IV32 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 AC020763.4-201ENST00000623414 4170 ntBASIC17.32■□□□□ 0.36
CCDC71Q8IV32 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 ESPNP-201ENST00000270691 2015 ntBASIC17.32■□□□□ 0.36
CCDC71Q8IV32 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CCDC71Q8IV32 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 KRT8P8-201ENST00000434750 1448 ntBASIC17.31■□□□□ 0.36
CCDC71Q8IV32 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 TSPY14P-201ENST00000303979 915 ntBASIC17.31■□□□□ 0.36
CCDC71Q8IV32 INGX-201ENST00000359239 846 ntBASIC17.31■□□□□ 0.36
CCDC71Q8IV32 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CCDC71Q8IV32 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CCDC71Q8IV32 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms