Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 RPS2P4-201ENST00000476944 856 ntBASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 FAM197Y4-202ENST00000622692 608 ntBASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 CR392000.1-201ENST00000624770 1228 ntBASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 AC135050.7-201ENST00000624508 2218 ntBASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC11.91□□□□□ -0.5
MRPL55Q7Z7F7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 EFTUD1P1-204ENST00000560401 1798 ntBASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 KRT8P3-201ENST00000519669 1449 ntBASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 RNF121-214ENST00000533380 870 ntTSL 3 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 AC011298.2-201ENST00000617989 482 ntBASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 AC073592.3-201ENST00000625118 1834 ntBASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
MRPL55Q7Z7F7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms