Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 AC010947.1-201ENST00000623454 693 ntBASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 GLDC-219ENST00000640208 420 ntTSL 2 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 AC099343.3-201ENST00000605834 2503 ntBASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 ESPNP-201ENST00000270691 2015 ntBASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
ZNF549Q6P9A3 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 NOC2LP1-202ENST00000452600 2235 ntBASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 TSPY14P-201ENST00000303979 915 ntBASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 CCR12P-201ENST00000446203 998 ntBASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
ZNF549Q6P9A3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
ZNF549Q6P9A3 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 AP000593.1-201ENST00000393668 712 ntBASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 BX088651.1-201ENST00000540551 451 ntBASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 C2orf69P3-201ENST00000565542 1120 ntBASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 AC116562.4-202ENST00000641738 218 ntBASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 AC093677.2-201ENST00000600169 1863 ntBASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ZNF549Q6P9A3 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 AC093827.2-201ENST00000512654 315 ntBASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 WWOX-216ENST00000569818 525 ntBASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 AC066615.1-201ENST00000640911 628 ntBASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ZNF549Q6P9A3 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms