Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CASC4Q6P4E1 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 PEX7-202ENST00000367756 680 ntTSL 3 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 AC112777.1-201ENST00000540175 1423 ntBASIC18.88■□□□□ 0.61
CASC4Q6P4E1 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CASC4Q6P4E1 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 AC142381.4-202ENST00000563973 229 ntBASIC18.87■□□□□ 0.61
CASC4Q6P4E1 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 AC026471.1-201ENST00000564629 3026 ntBASIC18.87■□□□□ 0.61
CASC4Q6P4E1 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CASC4Q6P4E1 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 AL158047.1-201ENST00000445918 881 ntBASIC18.86■□□□□ 0.61
CASC4Q6P4E1 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 AP000692.2-201ENST00000608391 879 ntBASIC18.86■□□□□ 0.61
CASC4Q6P4E1 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CASC4Q6P4E1 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 PRORSD1P-201ENST00000295112 541 ntBASIC18.85■□□□□ 0.61
CASC4Q6P4E1 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 SLC25A1P4-201ENST00000567977 778 ntBASIC18.85■□□□□ 0.61
CASC4Q6P4E1 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
CASC4Q6P4E1 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms