Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PPP4R3AQ6IN85 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
PPP4R3AQ6IN85 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 DUX4L26-201ENST00000489078 1255 ntBASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 AC063952.2-201ENST00000498792 1227 ntBASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PPP4R3AQ6IN85 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 AC126763.1-201ENST00000552015 2118 ntBASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 USP49-202ENST00000373010 2446 ntTSL 5 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 STARP1-201ENST00000397973 869 ntBASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PPP4R3AQ6IN85 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PPP4R3AQ6IN85 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 FAM8A6P-201ENST00000407496 1135 ntBASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 HOMER2P1-201ENST00000455653 964 ntBASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 AC034232.1-201ENST00000506026 1064 ntBASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 AC009065.1-201ENST00000564055 1225 ntBASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PPP4R3AQ6IN85 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms